The Howard Beach route ends at the Howard Beach – JFK Airport served by the IND Rockaway Line ( train). It stops at Lefferts Boulevard for shuttle bus service to long term parking lots A and B and the airport employee parking lot as well as the B15 bus to Brooklyn.
The Jamaica Station route ends at Jamaica on the Long Island Rail Road adjacent to Sutphin Boulevard – Archer Avenue - JFK Airport on the Archer Avenue Line ( trains). The AirTrain and LIRR stations are connected to the subway station by an elevator bank. Before separating for their final destinations, the Howard Beach and Jamaica routes stop at Federal Circle for car rental companies and shuttle buses to hotels and the airport's cargo areas. Both routes make a counterclockwise loop through the airport and stop at each terminal.